Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4316PFAM: glycosyl transferase family 2; KEGG: rbo:A1I_04625 glycosyltransferase. (450 aa)    
Predicted Functional Partners:
Mnod_4315
PFAM: glycosyl transferase group 1; KEGG: rpt:Rpal_4582 glycosyl transferase group 1.
    0.827
Mnod_4317
Hypothetical protein; KEGG: dac:Daci_1318 glycosyl transferase family protein.
  
  
 0.805
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.738
Mnod_3169
PFAM: glycosyl transferase family 2; KEGG: met:M446_4035 glycosyl transferase family protein.
 
    0.675
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.627
Mnod_3181
PFAM: glycosyl transferase family 2; KEGG: met:M446_4025 glycosyl transferase family protein.
 
    0.621
Mnod_4318
PFAM: glycosyl transferase group 1; KEGG: cyt:cce_0525 hypothetical protein.
  
    0.599
Mnod_4314
Hypothetical protein.
       0.563
Mnod_4310
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: mex:Mext_3715 polysaccharide biosynthesis protein CapD.
 
  
 0.517
Mnod_4320
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mbu:Mbur_1583 NAD-dependent epimerase/dehydratase.
 
  
 0.509
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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