Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4332KEGG: mpo:Mpop_2349 hypothetical protein. (233 aa)    
Predicted Functional Partners:
Mnod_1655
PFAM: ETC complex I subunit conserved region; KEGG: met:M446_0438 ETC complex I subunit region.
  
  
 0.585
Mnod_2210
PFAM: ETC complex I subunit conserved region; KEGG: mpo:Mpop_3683 ETC complex I subunit conserved region.
  
  
 0.585
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
 
 
 0.496
Mnod_4882
Hypothetical protein; KEGG: acr:Acry_0615 glycosyl transferase, group 1.
 
  
 0.444
Mnod_0676
KEGG: met:M446_1766 membrane protein involved in the export of O-antigen and teichoic acid-like protein.
 
     0.425
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
  
 0.412
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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