Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4345PFAM: glycosyl transferase family 2; KEGG: rrj:RrIowa_0552 glycosyltransferase. (847 aa)    
Predicted Functional Partners:
Mnod_4344
KEGG: rpt:Rpal_4584 hypothetical protein.
  
    0.790
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.738
Mnod_4346
PFAM: glycosyl transferase group 1; KEGG: rpt:Rpal_4582 glycosyl transferase group 1.
 
    0.729
Mnod_5890
PFAM: glycosyl transferase family 2; KEGG: dsh:Dshi_4143 glycosyl transferase family protein.
 
 
 0.703
Mnod_4347
Hypothetical protein.
       0.658
Mnod_3169
PFAM: glycosyl transferase family 2; KEGG: met:M446_4035 glycosyl transferase family protein.
 
    0.654
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.602
Mnod_3181
PFAM: glycosyl transferase family 2; KEGG: met:M446_4025 glycosyl transferase family protein.
 
    0.600
Mnod_4310
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: mex:Mext_3715 polysaccharide biosynthesis protein CapD.
 
  
 0.523
Mnod_0861
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mpo:Mpop_3538 lipopolysaccharide biosynthesis protein.
 
  
 0.453
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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