Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4355PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4589 lipopolysaccharide biosynthesis protein. (696 aa)    
Predicted Functional Partners:
Mnod_5213
PFAM: polysaccharide export protein; KEGG: met:M446_2957 polysaccharide export protein.
 
 
 0.965
Mnod_5609
PFAM: polysaccharide export protein; KEGG: mex:Mext_4134 polysaccharide export protein.
 
 
 0.965
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.963
Mnod_3185
PFAM: polysaccharide export protein; KEGG: met:M446_4021 polysaccharide export protein.
 
 
 0.959
Mnod_5877
PFAM: polysaccharide export protein; KEGG: met:M446_1072 polysaccharide export protein.
 
 
 0.949
Mnod_3022
PFAM: polysaccharide export protein; KEGG: rle:pRL110389 putative exopolysaccharide production protein.
 
 
 0.945
Mnod_0860
PFAM: polysaccharide export protein; KEGG: mrd:Mrad2831_4555 polysaccharide export protein.
 
 
 0.937
Mnod_6863
PFAM: polysaccharide export protein; KEGG: rle:pRL110389 putative exopolysaccharide production protein.
 
 
 0.934
Mnod_1938
PFAM: polysaccharide export protein; KEGG: met:M446_0324 polysaccharide export protein.
  
 
 0.862
Mnod_7135
PFAM: polysaccharide export protein; KEGG: met:M446_6357 polysaccharide export protein.
  
 
 0.862
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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