Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mnod_4357PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4586 glycosyl transferase group 1. (375 aa)    
Predicted Functional Partners:
Mnod_4358
PFAM: polysaccharide deacetylase; KEGG: mex:Mext_4585 polysaccharide deacetylase.
 
    0.831
Mnod_4359
KEGG: mrd:Mrad2831_5355 hypothetical protein.
 
     0.818
Mnod_4360
KEGG: mex:Mext_4583 polysaccharide biosynthesis protein.
 
    0.807
Mnod_4356
KEGG: mex:Mext_4588 hypothetical protein.
 
     0.541
Mnod_0698
PFAM: Abortive infection protein; KEGG: met:M446_1092 abortive infection protein.
  
     0.504
Mnod_0307
KEGG: met:M446_2298 hypothetical protein.
  
     0.491
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.491
Mnod_7549
KEGG: met:M446_6810 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
   
 0.491
Mnod_0156
KEGG: met:M446_4603 hypothetical protein.
  
 
   0.486
Mnod_5187
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4465 ABC transporter related.
 
   0.474
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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