Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mnod_4392PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_2733 AMP-dependent synthetase and ligase. (542 aa)    
Predicted Functional Partners:
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 0.954
Mnod_5238
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: met:M446_3278 acyl-CoA dehydrogenase domain-containing protein.
 
 
  0.926
Mnod_2841
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_2370 acyl-CoA dehydrogenase domain-containing protein.
 
 
  0.923
Mnod_2080
PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_2689 AMP-dependent synthetase and ligase.
  
  
 
0.912
Mnod_4413
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_3408 acyl-CoA dehydrogenase domain-containing protein.
 
 
  0.764
Mnod_5227
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: met:M446_3267 respiratory-chain NADH dehydrogenase domain-containing protein.
    
 
 0.680
Mnod_5440
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_0232 acyl-CoA dehydrogenase domain-containing protein.
 
 
  0.628
Mnod_4672
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_4773 acyl-CoA dehydrogenase domain-containing protein.
 
 
  0.605
Mnod_4490
PFAM: aminoglycoside phosphotransferase; KEGG: met:M446_4558 aminoglycoside phosphotransferase.
 
 
 0.594
Mnod_6788
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_1346 acyl-CoA dehydrogenase domain-containing protein.
 
 
  0.585
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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