Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_4423PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_3398 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (276 aa)    
Predicted Functional Partners:
Mnod_0649
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_4178 short-chain dehydrogenase/reductase SDR.
  
 
   0.643
Mnod_4424
PFAM: GtrA family protein; KEGG: met:M446_3397 GtrA family protein.
       0.616
Mnod_2717
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3342 short-chain dehydrogenase/reductase SDR.
  
 
   0.589
Mnod_0104
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_1731 short-chain dehydrogenase/reductase SDR.
  
 
   0.559
Mnod_4553
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_3062 short-chain dehydrogenase/reductase SDR.
  
 
   0.551
Mnod_4628
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_2600 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.551
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: met:M446_3399 carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
       0.528
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 
 0.493
Mnod_1129
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_2167 short-chain dehydrogenase/reductase SDR.
  
 
   0.449
Mnod_7299
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_5987 short-chain dehydrogenase/reductase SDR.
  
 
   0.440
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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