Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Mnod_4435TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: met:M446_3388 protein TolA. (472 aa)    
Predicted Functional Partners:
Mnod_4434
TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: met:M446_3389 protein TolR.
  
 
 0.987
tolQ
Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.971
Mnod_1396
TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: met:M446_0856 protein TolR.
  
 
 0.931
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.918
Mnod_0006
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spe:Spro_1016 TonB-dependent siderophore receptor.
  
 
 0.888
Mnod_1395
PFAM: MotA/TolQ/ExbB proton channel; KEGG: met:M446_0857 MotA/TolQ/ExbB proton channel.
  
 
 0.887
Mnod_5735
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mrd:Mrad2831_0861 TonB-dependent receptor plug.
 
 
 0.857
Mnod_1180
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpo:Mpop_4426 TonB-dependent receptor plug.
  
 
 0.838
Mnod_2044
Porin; PFAM: porin; KEGG: met:M446_4335 porin.
 
 
 0.818
Mnod_5256
Porin; KEGG: met:M446_3292 porin.
 
 
 0.811
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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