Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4444KEGG: met:M446_3249 hypothetical protein. (374 aa)    
Predicted Functional Partners:
Mnod_0393
KEGG: met:M446_2218 hypothetical protein.
  
     0.768
Mnod_1479
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.763
Mnod_1311
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.762
Mnod_1500
KEGG: met:M446_0679 hypothetical protein.
  
     0.762
Mnod_0705
KEGG: met:M446_2059 hypothetical protein.
  
     0.745
Mnod_6604
KEGG: met:M446_6067 hypothetical protein.
 
     0.743
Mnod_0713
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: met:M446_1122 peptidoglycan binding domain-containing protein.
  
     0.737
Mnod_4668
KEGG: met:M446_4778 hypothetical protein.
  
     0.731
Mnod_2179
PFAM: Sporulation domain protein; KEGG: met:M446_2481 sporulation domain-containing protein.
  
     0.728
Mnod_0718
KEGG: met:M446_1117 hypothetical protein.
  
     0.727
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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