STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4446PFAM: major facilitator superfamily MFS_1; KEGG: met:M446_3247 major facilitator transporter. (428 aa)    
Predicted Functional Partners:
Mnod_4445
ChaC family protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
  
    0.568
Mnod_7369
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_6620 ABC transporter related.
  
     0.468
Mnod_3401
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mpo:Mpop_3998 electron transfer flavoprotein beta-subunit.
  
     0.415
Mnod_0189
KEGG: met:M446_3651 putative periplasmic ligand-binding sensor protein.
  
     0.408
Mnod_4444
KEGG: met:M446_3249 hypothetical protein.
       0.402
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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