Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4453PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: met:M446_3241 glyoxalase/bleomycin resistance protein/dioxygenase. (136 aa)    
Predicted Functional Partners:
Mnod_0738
PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: sen:SACE_3168 3-demethylubiquinone-9 3-methyltransferase.
 
  
 0.594
Mnod_0826
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: cak:Caul_2584 3-demethylubiquinone-9 3-methyltransferase.
 
  
 0.593
Mnod_1363
Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pzu:PHZ_c3154 RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.589
Mnod_1364
PFAM: YCII-related; KEGG: bra:BRADO1155 hypothetical protein.
 
    0.509
Mnod_4452
PFAM: inner-membrane translocator; KEGG: met:M446_3242 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.498
cobB-2
PFAM: Silent information regulator protein Sir2; KEGG: met:M446_5854 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
  
    0.483
Mnod_4191
PFAM: carbon starvation protein CstA; KEGG: met:M446_2942 carbon starvation protein CstA.
  
    0.452
Mnod_0828
PFAM: regulatory protein ArsR; KEGG: cak:Caul_1116 ArsR family transcriptional regulator.
 
    0.436
Mnod_4966
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:gll0132 hypothetical protein.
 
  
 0.433
Mnod_1034
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bra:BRADO0452 bifunctional glutamine amidotransferase-like/transcriptional regulator protein.
 
    0.431
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.