STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4455KEGG: met:M446_3240 hypothetical protein. (191 aa)    
Predicted Functional Partners:
Mnod_0089
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_0534 adenylate/guanylate cyclase.
 
 
 
 0.841
Mnod_0096
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: met:M446_0534 adenylate/guanylate cyclase.
 
 
 
 0.841
Mnod_3450
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_2813 TPR repeat-containing adenylate/guanylate cyclase.
 
 
 
 0.838
Mnod_2315
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: met:M446_6439 TPR repeat-containing adenylate/guanylate cyclase.
   
 
 0.814
Mnod_4380
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_2747 TPR repeat-containing protein.
   
 
 0.802
Mnod_6504
TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: met:M446_5887 protease Do; Belongs to the peptidase S1C family.
  
 
 0.765
Mnod_3499
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mlo:mll2209 hypothetical protein.
  
 
 0.661
Mnod_4732
PFAM: Peptidase M23; KEGG: met:M446_4222 peptidase M23B.
   
   0.636
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.471
Mnod_2480
PFAM: TPR repeat-containing protein; peptidase C14 caspase catalytic subunit p20; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_0540 peptidase C14 caspase catalytic subunit P20.
   
 
 0.463
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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