STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4464KEGG: met:M446_5728 PE-PGRS family protein. (494 aa)    
Predicted Functional Partners:
Mnod_4739
PFAM: protein of unknown function DUF1150; KEGG: met:M446_4229 hypothetical protein.
  
     0.739
Mnod_5937
Phasin; TIGRFAM: phasin; KEGG: met:M446_5238 phasin.
  
     0.651
Mnod_5203
Phasin; TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: met:M446_2947 phasin.
  
     0.644
Mnod_7208
KEGG: met:M446_6292 hypothetical protein.
  
     0.634
Mnod_4533
KEGG: met:M446_3260 hypothetical protein.
  
     0.633
Mnod_5379
PFAM: protein of unknown function DUF423; KEGG: met:M446_5083 hypothetical protein.
  
     0.631
Mnod_6390
Phasin; KEGG: met:M446_5741 phasin.
  
     0.631
Mnod_7568
KEGG: met:M446_6832 hypothetical protein.
  
     0.619
Mnod_2326
Phasin; KEGG: met:M446_5741 phasin.
  
     0.577
Mnod_4517
KEGG: met:M446_3666 hypothetical protein.
  
     0.571
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.