STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4475PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: met:M446_4541 mandelate racemase/muconate lactonizing protein. (326 aa)    
Predicted Functional Partners:
Mnod_4476
PFAM: protein of unknown function DUF1611; KEGG: met:M446_4542 hypothetical protein.
 
  
  0.995
Mnod_2374
TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; KEGG: met:M446_1330 muconolactone delta-isomerase.
  
  
 0.785
Mnod_0748
PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bja:bll2679 dioxygenase.
  
  
 0.678
Mnod_2372
TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: met:M446_1328 catechol 1,2-dioxygenase.
  
  
 0.678
Mnod_4477
PFAM: extracellular solute-binding protein family 3; KEGG: met:M446_4543 extracellular solute-binding protein.
       0.524
Mnod_1648
PFAM: GCN5-related N-acetyltransferase; KEGG: met:M446_0447 GCN5-related N-acetyltransferase.
 
     0.492
Mnod_1116
PFAM: NLP/P60 protein; KEGG: met:M446_2154 NLP/P60 protein.
 
  
 0.402
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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