STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4540PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll4618 hypothetical protein. (205 aa)    
Predicted Functional Partners:
Mnod_6503
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bph:Bphy_5273 lysine exporter protein (LysE/YggA).
  
     0.762
Mnod_6693
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: esa:ESA_03737 threonine efflux system.
  
     0.716
Mnod_4541
PFAM: OmpA/MotB domain protein; KEGG: met:M446_3075 OmpA/MotB domain-containing protein.
       0.507
Mnod_4542
KEGG: met:M446_3074 hypothetical protein.
       0.462
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.