STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4546PFAM: PfkB domain protein; KEGG: met:M446_3070 ribokinase-like domain-containing protein. (311 aa)    
Predicted Functional Partners:
Mnod_4545
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: met:M446_3071 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
 
 0.993
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.937
Mnod_6583
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: met:M446_6599 galactarate dehydratase.
 
  
 0.892
Mnod_1739
PFAM: ribulose-phosphate 3-epimerase; KEGG: met:M446_5429 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.871
Mnod_2717
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3342 short-chain dehydrogenase/reductase SDR.
 
 0.856
Mnod_4805
PFAM: KDPG and KHG aldolase; KEGG: met:M446_4621 KDPG and KHG aldolase.
 
  
 0.794
hisA
TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: met:M446_6791 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
  
 0.713
Mnod_0976
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: azc:AZC_3347 mannitol dehydrogenase.
 
   
 0.700
Mnod_5601
PFAM: oxidoreductase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Oxidoreductase domain; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: ote:Oter_3247 oxidoreductase domain-containing protein.
  
  
 0.638
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
  
 0.612
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.