Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4579PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: met:M446_3036 amine oxidase. (438 aa)    
Predicted Functional Partners:
Mnod_1238
PFAM: Pyridoxal-dependent decarboxylase; KEGG: met:M446_1957 aromatic-L-amino-acid decarboxylase.
   
 0.918
Mnod_2908
PFAM: Aldehyde Dehydrogenase; KEGG: rec:RHECIAT_PC0000542 putative aldehyde dehydrogenase (NAD(+)) protein; Belongs to the aldehyde dehydrogenase family.
   
 0.911
Mnod_5499
PFAM: Aldehyde Dehydrogenase; KEGG: bbt:BBta_5124 putative aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 0.911
Mnod_5387
TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: met:M446_6106 zinc-binding alcohol dehydrogenase family protein.
    
  0.902
Mnod_2920
PFAM: GCN5-related N-acetyltransferase; KEGG: met:M446_2666 GCN5-related N-acetyltransferase.
     
  0.900
Mnod_1511
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: met:M446_0667 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
    
 0.853
Mnod_2906
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mlo:mll7048 dehydrogenase.
    
 0.853
Mnod_5474
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: met:M446_0266 glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.802
Mnod_5815
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: met:M446_5251 glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.802
Mnod_1504
PFAM: histone deacetylase superfamily; KEGG: met:M446_0674 histone deacetylase superfamily protein.
   
 0.770
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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