STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4595KEGG: met:M446_4794 hypothetical protein. (524 aa)    
Predicted Functional Partners:
Mnod_7208
KEGG: met:M446_6292 hypothetical protein.
  
     0.749
Mnod_4739
PFAM: protein of unknown function DUF1150; KEGG: met:M446_4229 hypothetical protein.
  
    0.706
Mnod_7506
KEGG: met:M446_6759 hypothetical protein.
  
     0.682
Mnod_1839
PFAM: Invasion associated locus B family protein; KEGG: met:M446_4885 invasion associated locus B family protein.
  
     0.655
Mnod_1064
PFAM: conserved hypothetical protein; KEGG: met:M446_2096 hypothetical protein.
  
     0.653
Mnod_5963
PFAM: protein of unknown function DUF1036; KEGG: met:M446_5206 hypothetical protein.
  
     0.652
Mnod_6698
Porin; PFAM: porin; KEGG: mpo:Mpop_0836 porin.
  
     0.645
Mnod_1624
Porin; KEGG: met:M446_4335 porin.
  
     0.641
Mnod_3321
Porin; KEGG: met:M446_4335 porin.
  
     0.620
Mnod_2044
Porin; PFAM: porin; KEGG: met:M446_4335 porin.
  
     0.616
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.