STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4609KEGG: met:M446_2616 UreA ABC transporter, ATP-binding protein UrtE; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase. (231 aa)    
Predicted Functional Partners:
Mnod_4607
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: met:M446_2618 UreA ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
Mnod_4606
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: met:M446_2619 UreA ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
Mnod_4605
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: met:M446_2620 putative UreA short-chain amide.
 
 
 0.993
Mnod_4608
KEGG: met:M446_2617 UreA ABC transporter, ATP-binding protein UrtD; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; SMART: AAA ATPase.
 
0.989
Mnod_1162
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1796 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.754
Mnod_3750
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0874 high-affinity branched-chain amino acid transport system permease protein LivH / high-affinity branched-chain amino acid transport ATP-binding protein LivG.
  
  
 0.754
Mnod_5329
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_0777 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.754
Mnod_6585
PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_6491 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.754
Mnod_1242
PFAM: inner-membrane translocator; KEGG: met:M446_1977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.697
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.694
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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