STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4664PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: met:M446_4783 alcohol dehydrogenase. (307 aa)    
Predicted Functional Partners:
Mnod_4661
KEGG: met:M446_4786 hypothetical protein.
 
    0.958
Mnod_4662
PFAM: glycosyl transferase group 1; KEGG: met:M446_4785 glycosyl transferase group 1.
 
    0.958
Mnod_4663
KEGG: met:M446_4784 hypothetical protein.
 
     0.956
Mnod_5570
TIGRFAM: methyltransferase FkbM family; KEGG: met:M446_2056 FkbM family methyltransferase.
 
    0.713
Mnod_0251
PFAM: bifunctional deaminase-reductase domain protein; KEGG: met:M446_2359 deaminase-reductase domain-containing protein.
 
    0.701
Mnod_4665
KEGG: met:M446_4782 glycosyl transferase family protein.
 
     0.687
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.583
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
 
  
 0.465
Mnod_3391
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mex:Mext_3738 sarcosine oxidase alpha subunit family protein.
  
  
 0.435
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.