Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_4674PFAM: Ferritin Dps family protein; KEGG: met:M446_4661 ferritin Dps family protein; Belongs to the Dps family. (199 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.864
Mnod_2843
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: met:M446_2368 flavoprotein WrbA.
  
  
 0.763
Mnod_5263
KEGG: met:M446_3301 hypothetical protein.
  
  
 0.739
Mnod_7069
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: met:M446_6236 putative serine protein kinase, PrkA.
   
    0.738
hpf
Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.733
Mnod_1165
PFAM: OsmC family protein; KEGG: mex:Mext_4270 OsmC family protein.
  
  
 0.730
Mnod_4765
PFAM: OsmC family protein; KEGG: met:M446_4255 OsmC family protein.
  
  
 0.730
Mnod_4002
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: met:M446_3531 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
  
 0.671
Mnod_2758
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bja:blr5308 anti-oxidant protein.
  
  
 0.657
Mnod_1636
PFAM: Peptidoglycan-binding LysM; KEGG: met:M446_0461 peptidoglycan-binding LysM.
   
  
 0.631
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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