Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4694TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC. (1047 aa)    
Predicted Functional Partners:
Mnod_6171
PFAM: aminoglycoside phosphotransferase; KEGG: met:M446_6097 hypothetical protein.
 
    0.672
Mnod_2322
PFAM: Erythromycin esterase; KEGG: met:M446_2872 erythromycin esterase.
 
  
 0.666
Mnod_4695
KEGG: ava:Ava_5063 hypothetical protein.
 
     0.585
Mnod_6766
PFAM: MgtC/SapB transporter; KEGG: met:M446_6569 MgtC/SapB transporter.
  
 
 0.579
Mnod_1497
Peptidase M50; PFAM: CBS domain containing protein; peptidase M50; KEGG: met:M446_0694 peptidase M50.
 
    0.562
Mnod_4696
KEGG: ava:Ava_5063 hypothetical protein.
 
     0.534
Mnod_2971
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: dge:Dgeo_2081 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
  
 
 0.530
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 
 0.490
Mnod_3112
PFAM: UspA domain protein; sodium/hydrogen exchanger; KEGG: met:M446_2825 sodium/hydrogen exchanger.
  
 
 0.487
Mnod_7234
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: met:M446_6484 DEAD/DEAH box helicase domain-containing protein.
 
 0.482
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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