STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4717KEGG: met:M446_4202 hypothetical protein. (295 aa)    
Predicted Functional Partners:
Mnod_4714
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.995
Mnod_4715
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: met:M446_4200 flagellar motor switch protein FliM.
 
  
 0.989
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.977
Mnod_6064
PFAM: flagellar hook-length control protein; KEGG: met:M446_5119 flagellar hook-length control protein.
 
  
 0.974
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: met:M446_5153 flagellar hook-basal body complex protein FliE.
 
  
 0.969
Mnod_6059
KEGG: met:M446_5124 putative flagellar assembly protein FliH.
 
    0.969
Mnod_4711
TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: met:M446_4196 flagella basal body P-ring formation protein FlgA.
 
    0.966
Mnod_6063
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.951
Mnod_4716
KEGG: met:M446_4201 hypothetical protein.
 
     0.949
Mnod_2311
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: met:M446_4185 flagellar hook-associated protein FlgK.
 
  
 0.947
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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