Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Mnod_4791PFAM: conserved hypothetical protein; KEGG: met:M446_2637 hypothetical protein; Belongs to the UPF0262 family. (162 aa)    
Predicted Functional Partners:
Mnod_4792
PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: met:M446_2636 protein tyrosine phosphatase.
     0.932
hisD-2
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.724
Mnod_7282
PFAM: thiamine monophosphate synthase; KEGG: met:M446_6005 thiamine monophosphate synthase.
  
     0.695
Mnod_0266
PFAM: protein of unknown function DUF983; KEGG: met:M446_2343 hypothetical protein.
 
   
 0.673
Mnod_1375
PFAM: protein of unknown function DUF526; KEGG: met:M446_0853 hypothetical protein.
  
     0.671
Mnod_6738
KEGG: met:M446_6497 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A.
  
     0.650
Mnod_7412
PFAM: protein of unknown function DUF983; KEGG: met:M446_6673 hypothetical protein.
 
   
 0.631
Mnod_6039
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: met:M446_0296 NADH:ubiquinone oxidoreductase subunit.
  
   
 0.618
Mnod_4624
KEGG: met:M446_2605 hypothetical protein.
  
   
 0.593
Mnod_7179
TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: met:M446_6314 hemimethylated DNA binding protein.
  
     0.584
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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