Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4819PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: met:M446_2575 2Fe-2S iron-sulfur cluster binding domain-containing protein. (151 aa)    
Predicted Functional Partners:
Mnod_4818
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: met:M446_2576 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.985
Mnod_6607
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: met:M446_6070 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.912
Mnod_4568
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: met:M446_3047 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.911
Mnod_1032
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: met:M446_1417 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.910
Mnod_1755
KEGG: met:M446_5448 xanthine dehydrogenase accessory factor.
 
  
 0.733
Mnod_1757
KEGG: met:M446_5450 4-diphosphocytidyl-2C-methyl-D-erythritol synthase.
 
  
 0.700
Mnod_2924
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: met:M446_2671 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.666
Mnod_1754
PFAM: protein of unknown function DUF182; KEGG: met:M446_5447 hypothetical protein.
 
  
 0.659
Mnod_2020
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_1291 molybdopterin dehydrogenase FAD-binding.
 
 0.640
Mnod_2022
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mpo:Mpop_3559 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.638
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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