STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4871Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mrd:Mrad2831_0408 Crp/FNR family transcriptional regulator. (228 aa)    
Predicted Functional Partners:
Mnod_5386
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: met:M446_6107 Crp/FNR family transcriptional regulator.
  
  
 
0.904
Mnod_4870
KEGG: met:M446_1561 hypothetical protein.
       0.773
Mnod_3035
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mrd:Mrad2831_0324 Crp/FNR family transcriptional regulator.
  
     0.596
Mnod_4596
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: met:M446_0723 Crp/FNR family transcriptional regulator.
  
     0.553
Mnod_0089
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_0534 adenylate/guanylate cyclase.
  
 0.550
Mnod_0096
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: met:M446_0534 adenylate/guanylate cyclase.
  
 0.550
Mnod_3450
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_2813 TPR repeat-containing adenylate/guanylate cyclase.
  
 0.550
Mnod_4872
PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: met:M446_1294 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
 
     0.497
Mnod_1067
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4297 short-chain dehydrogenase/reductase SDR.
  
 0.444
Mnod_2132
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: met:M446_6129 Crp/FNR family transcriptional regulator.
  
   
 0.426
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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