STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4885KEGG: xau:Xaut_3460 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein. (357 aa)    
Predicted Functional Partners:
Mnod_2663
KEGG: mpo:Mpop_3602 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
  
  
  0.922
Mnod_2664
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: met:M446_1595 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein.
  
  
  0.918
Mnod_0054
KEGG: met:M446_0054 putative periplasmic substrate-binding transmembrane protein.
  
  
  0.914
Mnod_2677
KEGG: met:M446_3450 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein.
  
  
  0.913
Mnod_1057
SMART: extracellular solute-binding protein family 3; KEGG: met:M446_1431 extracellular solute-binding protein.
     
  0.900
Mnod_2254
KEGG: rfr:Rfer_2748 extracellular solute-binding protein.
     
  0.900
Mnod_2258
NMT1/THI5 like domain protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc1198 signal peptide protein.
     
  0.900
Mnod_4896
KEGG: met:M446_3458 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
     
  0.900
Mnod_4886
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component.
 
 
 0.825
Mnod_4887
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_3458 ABC transporter related.
 
 
 0.776
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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