Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_4909PFAM: heat shock protein DnaJ domain protein; protein of unknown function DUF1332; KEGG: met:M446_4375 heat shock protein DnaJ domain-containing protein. (245 aa)    
Predicted Functional Partners:
Mnod_3988
PFAM: NifQ family protein; KEGG: met:M446_3543 NifQ family protein.
  
 0.960
Mnod_7171
KEGG: met:M446_6321 NifU domain-containing protein.
  
 0.960
Mnod_2958
PFAM: Heat shock protein 70; KEGG: rso:RSp0521 chaperone transmembrane protein.
  
 0.885
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.885
Mnod_4817
KEGG: met:M446_2578 HSP70 family molecular chaperone.
  
 0.878
Mnod_4910
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: met:M446_4374 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD.
     
 0.862
Mnod_0643
PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aba:Acid345_2275 aminotransferase, class V.
  
 0.807
Mnod_5849
PFAM: aminotransferase class V; KEGG: met:M446_5110 aminotransferase class V.
  
 0.807
Mnod_2171
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: met:M446_2468 iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.748
Mnod_3325
TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: met:M446_4331 FeS assembly scaffold SufA; Belongs to the HesB/IscA family.
  
 
 0.748
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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