STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_4941PFAM: diacylglycerol kinase catalytic region; KEGG: met:M446_2552 diacylglycerol kinase catalytic region. (305 aa)    
Predicted Functional Partners:
Mnod_4942
PFAM: Integral membrane protein TerC; KEGG: met:M446_2551 integral membrane protein TerC.
       0.808
Mnod_4940
KEGG: met:M446_2553 hypothetical protein.
       0.584
Mnod_1170
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: met:M446_1812 glutamate synthase (ferredoxin).
  
  
 0.552
Mnod_0636
KEGG: cyt:cce_5237 hypothetical protein.
    
 0.539
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.516
groL-2
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.516
Mnod_0154
PFAM: phosphoesterase PA-phosphatase related; KEGG: met:M446_4605 phosphoesterase PA-phosphatase related.
 
 
 0.486
Mnod_1165
PFAM: OsmC family protein; KEGG: mex:Mext_4270 OsmC family protein.
  
  
 0.450
Mnod_3712
PFAM: protein of unknown function UPF0057; KEGG: met:M446_2651 hypothetical protein.
 
    0.442
Mnod_4939
KEGG: met:M446_2554 hypothetical protein.
  
    0.419
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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