STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_4976TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: met:M446_4947 potassium efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (607 aa)    
Predicted Functional Partners:
Mnod_5461
PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: met:M446_0254 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.744
Mnod_7264
TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: met:M446_6023 potassium efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.740
Mnod_3112
PFAM: UspA domain protein; sodium/hydrogen exchanger; KEGG: met:M446_2825 sodium/hydrogen exchanger.
 
  
0.736
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.558
Mnod_4996
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rle:RL2909 putative NAD(P)H dehydrogenase.
  
 
 0.541
Mnod_7573
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pol:Bpro_0214 TrkA-N.
     
 0.540
Mnod_4977
KEGG: met:M446_4948 hypothetical protein.
       0.539
Mnod_7572
PFAM: cation transporter; KEGG: nar:Saro_0397 cation transporter.
     
 0.458
Mnod_4183
KEGG: rec:RHECIAT_PC0000307 putative aminoacid/polyamine transporter, permease protein.
     
 0.435
Mnod_7391
PFAM: sodium/hydrogen exchanger; KEGG: met:M446_6647 sodium/hydrogen exchanger.
     
 0.432
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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