Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_5006Transposase mutator type; Required for the transposition of the insertion element. (337 aa)    
Predicted Functional Partners:
Mnod_6453
PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: nwi:Nwi_3112 helix-turn-helix, fis-type.
 
   
 0.570
Mnod_5007
Hypothetical protein; KEGG: ret:RHE_PA00094 putative insertion sequence transposase protein.
  
    0.514
Mnod_2966
Transposase; KEGG: gbe:GbCGDNIH1_1045 transposase.
 
     0.485
Mnod_3500
PFAM: Integrase catalytic region; KEGG: mpo:Mpop_3817 integrase catalytic region.
 
     0.452
Mnod_6834
PFAM: Integrase catalytic region; KEGG: met:M446_6408 integrase catalytic region.
 
   
 0.424
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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