STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_5080Hypothetical protein. (142 aa)    
Predicted Functional Partners:
Mnod_5074
Hypothetical protein.
       0.773
Mnod_5075
KEGG: gdi:GDI3661 hypothetical protein.
       0.773
Mnod_5076
Hypothetical protein.
       0.773
Mnod_5077
Putative deoxyribonuclease; KEGG: bid:Bind_3505 conserved hypothetical protein; putative deoxyribonuclease.
       0.773
Mnod_5078
KEGG: met:M446_4093 hypothetical protein.
       0.773
Mnod_5079
PFAM: MT-A70 family protein; KEGG: met:M446_4092 MT-A70 family protein; Belongs to the MT-A70-like family.
       0.773
Mnod_5081
PFAM: VRR-NUC domain protein; KEGG: rfr:Rfer_4465 hypothetical protein.
       0.773
Mnod_5082
Hypothetical protein.
       0.485
Mnod_5073
PFAM: ROSMUCR transcriptional regulator; KEGG: met:M446_6298 MucR family transcriptional regulator.
       0.458
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.