STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_5124PFAM: CBS domain containing protein; KEGG: met:M446_3231 signal-transduction protein. (143 aa)    
Predicted Functional Partners:
Mnod_5727
PFAM: CBS domain containing protein; KEGG: met:M446_1768 signal-transduction protein.
  
     0.758
Mnod_2115
PFAM: CBS domain containing protein; KEGG: met:M446_1768 signal-transduction protein.
  
     0.738
Mnod_5125
PFAM: Rhomboid family protein; KEGG: met:M446_3232 rhomboid family protein.
     
 0.677
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.510
Mnod_1170
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: met:M446_1812 glutamate synthase (ferredoxin).
     
 0.508
Mnod_6174
PFAM: CBS domain containing protein; transport-associated; SMART: Transport-associated and nodulation region; KEGG: met:M446_3570 CBS domain-containing protein.
 
   
 0.492
Mnod_1272
Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.460
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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