Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_5145PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4509 ABC transporter related. (267 aa)    
Predicted Functional Partners:
Mnod_5146
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4508 binding-protein-dependent transport systems inner membrane component.
 
 
 0.973
Mnod_5147
SMART: extracellular solute-binding protein family 3; KEGG: met:M446_4507 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein.
 
 
 0.941
Mnod_4886
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component.
 
 
 0.869
Mnod_0326
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2276 binding-protein-dependent transport systems inner membrane component.
 
 
 0.867
Mnod_4895
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_3457 binding-protein-dependent transport systems inner membrane component.
 
 
 0.867
Mnod_3419
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_4580 binding-protein-dependent transport systems inner membrane component.
 
 
 0.841
Mnod_0055
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0055 binding-protein-dependent transport systems inner membrane component.
 
 
 0.839
Mnod_2985
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0770 binding-protein-dependent transport systems inner membrane component.
 
 
 0.839
Mnod_2679
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_3451 ABC transporter related.
 
 
 0.831
Mnod_5516
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_5130 binding-protein-dependent transport systems inner membrane component.
 
 
 0.816
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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