Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_5165TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4486 polar amino acid ABC transporter, inner membrane subunit. (232 aa)    
Predicted Functional Partners:
Mnod_5163
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4488 ABC transporter related.
 
 
 0.996
Mnod_5166
PFAM: extracellular solute-binding protein family 3; KEGG: met:M446_4485 extracellular solute-binding protein.
 0.995
Mnod_5164
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4487 polar amino acid ABC transporter, inner membrane subunit.
 
 
0.987
Mnod_6710
PFAM: extracellular solute-binding protein family 3; KEGG: met:M446_6191 extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.819
Mnod_2392
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: met:M446_3587 extracellular solute-binding protein.
 
 0.810
Mnod_0891
PFAM: extracellular solute-binding protein family 3; KEGG: bpt:Bpet4446 solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.807
Mnod_3673
PFAM: extracellular solute-binding protein family 3; KEGG: met:M446_1742 extracellular solute-binding protein.
 
 
 0.803
Mnod_2390
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3589 ABC transporter related.
 
  
 0.791
Mnod_3674
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1741 ABC transporter related.
 
  
 0.790
Mnod_0894
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4478 amino acid ABC transporter, ATP-binding protein.
 
  
 0.789
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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