Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_5167PFAM: GCN5-related N-acetyltransferase; KEGG: met:M446_4484 GCN5-related N-acetyltransferase. (166 aa)    
Predicted Functional Partners:
Mnod_5166
PFAM: extracellular solute-binding protein family 3; KEGG: met:M446_4485 extracellular solute-binding protein.
       0.454
Mnod_5164
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4487 polar amino acid ABC transporter, inner membrane subunit.
       0.448
Mnod_5165
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4486 polar amino acid ABC transporter, inner membrane subunit.
       0.448
Mnod_5163
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4488 ABC transporter related.
       0.430
Mnod_1385
Pyrimidine 5'-nucleotidase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: met:M446_0867 pyrimidine 5'-nucleotidase.
 
    0.408
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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