STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_5271KEGG: met:M446_3080 hypothetical protein. (251 aa)    
Predicted Functional Partners:
Mnod_5272
KEGG: met:M446_3081 hypothetical protein.
 
    0.970
Mnod_5274
KEGG: met:M446_3083 molybdopterin-guanine dinucleotide biosynthesis protein A.
 
    0.966
Mnod_5273
KEGG: met:M446_3082 hypothetical protein.
 
     0.963
Mnod_5275
KEGG: met:M446_3084 hypothetical protein.
 
     0.960
Mnod_5270
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_3079 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
     0.912
Mnod_5276
PFAM: cytoplasmic chaperone TorD family protein; KEGG: met:M446_3085 cytoplasmic chaperone TorD family protein.
 
     0.901
Mnod_5278
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: met:M446_3087 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.875
Mnod_5279
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_3088 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
     0.857
Mnod_5280
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: met:M446_3089 formate dehydrogenase, gamma subunit.
 
     0.852
Mnod_5293
PFAM: WD-40 repeat protein; cytochrome c class I; KEGG: met:M446_3100 cytochrome c class I.
 
     0.780
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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