Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_5299PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: met:M446_3106 peptidoglycan binding domain-containing protein. (426 aa)    
Predicted Functional Partners:
Mnod_0216
Protein of unknown function DUF882; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; protein of unknown function DUF882; Peptidase M15A; KEGG: met:M446_3151 hypothetical protein.
 
   
 0.769
slyX
PFAM: SlyX family protein; KEGG: met:M446_3105 SlyX family protein; Belongs to the SlyX family.
       0.586
Mnod_5898
KEGG: met:M446_5308 hypothetical protein.
  
   
 0.514
Mnod_7674
TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; KEGG: met:M446_6960 nitrile hydratase, alpha subunit.
     
  0.500
Mnod_5300
KEGG: met:M446_3107 hypothetical protein.
       0.492
Mnod_4595
KEGG: met:M446_4794 hypothetical protein.
  
   
 0.486
Mnod_5301
PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: met:M446_3108 hypothetical protein.
       0.478
Mnod_1139
PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: met:M446_2176 peptidase U6 penicillin-insensitive murein endopeptidase.
  
     0.429
Mnod_5739
PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: met:M446_2176 peptidase U6 penicillin-insensitive murein endopeptidase.
  
     0.416
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.