STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_5329ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_0777 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family. (586 aa)    
Predicted Functional Partners:
Mnod_5328
PFAM: inner-membrane translocator; KEGG: rpt:Rpal_1995 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.986
Mnod_5327
PFAM: Extracellular ligand-binding receptor; KEGG: lch:Lcho_2401 extracellular ligand-binding receptor.
 
  
 0.960
Mnod_5330
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dra:DR_A0260 branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
0.952
Mnod_1242
PFAM: inner-membrane translocator; KEGG: met:M446_1977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.869
Mnod_1163
PFAM: inner-membrane translocator; KEGG: met:M446_1797 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.859
Mnod_6586
PFAM: inner-membrane translocator; KEGG: met:M446_6490 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.827
Mnod_1164
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_1798 extracellular ligand-binding receptor.
 
  
 0.822
Mnod_0332
PFAM: inner-membrane translocator; KEGG: met:M446_2270 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.820
Mnod_1099
PFAM: inner-membrane translocator; KEGG: met:M446_2127 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.818
Mnod_3963
PFAM: inner-membrane translocator; KEGG: met:M446_3840 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.817
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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