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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Mnod_5415TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; KEGG: acr:Acry_3314 CRISPR-associated helicase Cas3. (897 aa)    
Predicted Functional Partners:
Mnod_5412
TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: gdi:GDI2207 hypothetical protein.
 
 
 0.977
Mnod_5414
TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: acr:Acry_1813 CRISPR-associated CSE1 family protein.
 
 
 0.975
Mnod_5411
TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: rru:Rru_A0171 CRISPR-associated Cas5e family protein.
 
 
 0.971
Mnod_3201
TIGRFAM: CRISPR-associated protein Cas5 family; PFAM: CRISPR-associated protein CT1976; KEGG: rru:Rru_A0345 CRISPR-associated Cas5e family protein.
 
 
 0.941
Mnod_5408
TIGRFAM: CRISPR-associated protein Cas2; KEGG: rru:Rru_A0168 hypothetical protein.
 
  
 0.922
cas1
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.920
Mnod_5413
TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; KEGG: gdi:GDI2208 hypothetical protein.
 
  
 0.912
Mnod_5410
TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: acr:Acry_1809 CRISPR-associated CSE3 family protein.
 
   
 0.910
Mnod_5416
PFAM: integrase family protein; KEGG: met:M446_6399 integrase family protein; Belongs to the 'phage' integrase family.
       0.445
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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