Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_5473PFAM: sodium/calcium exchanger membrane region; KEGG: met:M446_0265 sodium/calcium exchanger membrane region. (361 aa)    
Predicted Functional Partners:
Mnod_5474
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: met:M446_0266 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.572
Mnod_7391
PFAM: sodium/hydrogen exchanger; KEGG: met:M446_6647 sodium/hydrogen exchanger.
  
 
 0.565
Mnod_1723
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: met:M446_0415 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
    0.484
Mnod_5475
TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: met:M446_0267 aminopeptidase N.
 
    0.482
Mnod_7150
PFAM: amidinotransferase; KEGG: met:M446_6335 non-specific serine/threonine protein kinase.
   
    0.454
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
  
 0.439
Mnod_1062
PFAM: ribonuclease BN; KEGG: met:M446_1426 ribonuclease BN.
  
    0.438
Mnod_3110
PFAM: ribonuclease BN; KEGG: met:M446_3778 ribonuclease BN.
  
    0.438
Mnod_4509
PFAM: ribonuclease BN; KEGG: met:M446_4573 ribonuclease BN.
  
    0.438
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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