STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_6160PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE. (141 aa)    
Predicted Functional Partners:
Mnod_2321
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mpo:Mpop_0117 protein of unknown function DUF395 YeeE/YedE.
 
     0.791
Mnod_6159
KEGG: met:M446_6929 natural resistance-associated macrophage protein.
       0.773
Mnod_7291
PFAM: SirA family protein; KEGG: met:M446_5996 SirA family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.606
Mnod_6158
KEGG: met:M446_6928 cytochrome c class I.
  
    0.550
Mnod_1170
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: met:M446_1812 glutamate synthase (ferredoxin).
      
 0.420
Mnod_6161
Hypothetical protein.
       0.409
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.