Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mnod_0763 | Mnod_2977 | KEGG: met:M446_2052 heat repeat-containing PBS lyase. | KEGG: rca:Rcas_3465 hypothetical protein. | 0.445 |
Mnod_0763 | Mnod_6835 | KEGG: met:M446_2052 heat repeat-containing PBS lyase. | Hypothetical protein; KEGG: met:M446_5531 transposase. | 0.530 |
Mnod_0763 | Mnod_7603 | KEGG: met:M446_2052 heat repeat-containing PBS lyase. | KEGG: mrd:Mrad2831_6371 hypothetical protein. | 0.489 |
Mnod_0951 | Mnod_6835 | PFAM: CsbD family protein; KEGG: acr:Acry_3194 CsbD family protein; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein; KEGG: met:M446_5531 transposase. | 0.433 |
Mnod_2341 | Mnod_2879 | KEGG: mex:Mext_0063 hypothetical protein. | PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: met:M446_3690 type III restriction protein res subunit. | 0.492 |
Mnod_2341 | Mnod_2977 | KEGG: mex:Mext_0063 hypothetical protein. | KEGG: rca:Rcas_3465 hypothetical protein. | 0.716 |
Mnod_2341 | Mnod_6835 | KEGG: mex:Mext_0063 hypothetical protein. | Hypothetical protein; KEGG: met:M446_5531 transposase. | 0.465 |
Mnod_2341 | Mnod_7603 | KEGG: mex:Mext_0063 hypothetical protein. | KEGG: mrd:Mrad2831_6371 hypothetical protein. | 0.698 |
Mnod_2879 | Mnod_2341 | PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: met:M446_3690 type III restriction protein res subunit. | KEGG: mex:Mext_0063 hypothetical protein. | 0.492 |
Mnod_2879 | Mnod_2977 | PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: met:M446_3690 type III restriction protein res subunit. | KEGG: rca:Rcas_3465 hypothetical protein. | 0.821 |
Mnod_2879 | Mnod_6835 | PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: met:M446_3690 type III restriction protein res subunit. | Hypothetical protein; KEGG: met:M446_5531 transposase. | 0.652 |
Mnod_2879 | Mnod_7603 | PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: met:M446_3690 type III restriction protein res subunit. | KEGG: mrd:Mrad2831_6371 hypothetical protein. | 0.729 |
Mnod_2977 | Mnod_0763 | KEGG: rca:Rcas_3465 hypothetical protein. | KEGG: met:M446_2052 heat repeat-containing PBS lyase. | 0.445 |
Mnod_2977 | Mnod_2341 | KEGG: rca:Rcas_3465 hypothetical protein. | KEGG: mex:Mext_0063 hypothetical protein. | 0.716 |
Mnod_2977 | Mnod_2879 | KEGG: rca:Rcas_3465 hypothetical protein. | PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: met:M446_3690 type III restriction protein res subunit. | 0.821 |
Mnod_2977 | Mnod_4312 | KEGG: rca:Rcas_3465 hypothetical protein. | KEGG: met:M446_1477 hypothetical protein. | 0.479 |
Mnod_2977 | Mnod_4327 | KEGG: rca:Rcas_3465 hypothetical protein. | KEGG: oan:Oant_0704 integrase catalytic region. | 0.427 |
Mnod_2977 | Mnod_6305 | KEGG: rca:Rcas_3465 hypothetical protein. | KEGG: rle:pRL70142 hypothetical protein. | 0.426 |
Mnod_2977 | Mnod_6835 | KEGG: rca:Rcas_3465 hypothetical protein. | Hypothetical protein; KEGG: met:M446_5531 transposase. | 0.733 |
Mnod_4312 | Mnod_2977 | KEGG: met:M446_1477 hypothetical protein. | KEGG: rca:Rcas_3465 hypothetical protein. | 0.479 |
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