STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_6983KEGG: met:M446_4089 hypothetical protein. (134 aa)    
Predicted Functional Partners:
Mnod_6984
KEGG: met:M446_4090 putative bacteriophage-related protein.
       0.725
Mnod_6988
PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: met:M446_4095 DnaB domain-containing protein.
       0.724
Mnod_6989
KEGG: met:M446_4096 hypothetical protein.
       0.724
Mnod_6985
KEGG: mag:amb0461 hypothetical protein.
       0.719
Mnod_6986
KEGG: met:M446_4093 hypothetical protein.
       0.719
Mnod_6987
Hypothetical protein.
       0.714
Mnod_6990
NusG antitermination factor; PFAM: NGN domain protein; KEGG: met:M446_5952 NusG antitermination factor.
       0.575
Mnod_6982
Putative plasmid maintenance system antidote protein, XRE family.
       0.427
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.