STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_7551PFAM: glycosyl transferase family 20; KEGG: met:M446_6822 alpha,alpha-trehalose-phosphate synthase (UDP-forming). (473 aa)    
Predicted Functional Partners:
Mnod_0220
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 
 0.997
Mnod_1176
TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: met:M446_1805 UTP-glucose-1-phosphate uridylyltransferase.
    
 0.929
Mnod_6871
PFAM: glycosyl transferase group 1; KEGG: rle:pRL110391 putative phosphatidylinositol alpha-mannosyltransferase.
    
 0.905
Mnod_3741
TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1367 cellulose synthase catalytic subunit (UDP-forming).
  
 
  0.903
Mnod_3175
PFAM: Nucleotidyl transferase; KEGG: met:M446_4031 nucleotidyl transferase.
     
  0.800
Mnod_3176
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: met:M446_4030 NAD-dependent epimerase/dehydratase.
     
  0.800
Mnod_4525
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: met:M446_3211 NAD-dependent epimerase/dehydratase.
     
  0.800
Mnod_2873
PFAM: glycoside hydrolase 15-related; KEGG: met:M446_3739 glycoside hydrolase 15-related.
 
   
 0.794
Mnod_7546
KEGG: met:M446_6807 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
  
 0.769
Mnod_7548
KEGG: met:M446_6809 malto-oligosyltrehalose synthase; TIGRFAM: 4-alpha-glucanotransferase; malto-oligosyltrehalose synthase; PFAM: glycoside hydrolase family 77; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
  
 0.756
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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