Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SET03113.1 | SET07523.1 | SAMN05216313_101399 | SAMN05216313_10214 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
SET03113.1 | SET09950.1 | SAMN05216313_101399 | SAMN05216313_102110 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.968 |
SET03113.1 | SET29293.1 | SAMN05216313_101399 | SAMN05216313_10483 | Diguanylate cyclase (GGDEF) domain-containing protein. | Putative two-component system response regulator. | 0.999 |
SET03113.1 | SET44788.1 | SAMN05216313_101399 | SAMN05216313_106143 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SET03113.1 | SET45755.1 | SAMN05216313_101399 | SAMN05216313_106195 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
SET03113.1 | SET51372.1 | SAMN05216313_101399 | SAMN05216313_107151 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.996 |
SET03113.1 | SET65000.1 | SAMN05216313_101399 | SAMN05216313_11087 | Diguanylate cyclase (GGDEF) domain-containing protein. | Putative two-component system response regulator. | 0.999 |
SET03113.1 | SET96151.1 | SAMN05216313_101399 | SAMN05216313_12176 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
SET03113.1 | SEU11223.1 | SAMN05216313_101399 | SAMN05216313_13210 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SET03113.1 | SEU17098.1 | SAMN05216313_101399 | SAMN05216313_14132 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
SET07523.1 | SET03113.1 | SAMN05216313_10214 | SAMN05216313_101399 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
SET07523.1 | SET09950.1 | SAMN05216313_10214 | SAMN05216313_102110 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.977 |
SET07523.1 | SET29293.1 | SAMN05216313_10214 | SAMN05216313_10483 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Putative two-component system response regulator. | 0.970 |
SET07523.1 | SET44788.1 | SAMN05216313_10214 | SAMN05216313_106143 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.961 |
SET07523.1 | SET45755.1 | SAMN05216313_10214 | SAMN05216313_106195 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
SET07523.1 | SET51372.1 | SAMN05216313_10214 | SAMN05216313_107151 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.934 |
SET07523.1 | SET65000.1 | SAMN05216313_10214 | SAMN05216313_11087 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Putative two-component system response regulator. | 0.968 |
SET07523.1 | SET96151.1 | SAMN05216313_10214 | SAMN05216313_12176 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SET07523.1 | SEU11223.1 | SAMN05216313_10214 | SAMN05216313_13210 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.961 |
SET07523.1 | SEU17098.1 | SAMN05216313_10214 | SAMN05216313_14132 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.791 |
page 1 of 6