STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET32780.1Carbon-monoxide dehydrogenase iron sulfur subunit. (150 aa)    
Predicted Functional Partners:
cooS
Carbon-monoxide dehydrogenase catalytic subunit.
 
  
 0.983
SET90947.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.966
nifJ
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.964
SEU15037.1
Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.961
SES99024.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.960
SET32653.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.959
SET32792.1
Pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.951
SET25022.1
NAD(P)H-dependent nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.950
SET43237.1
NADH-quinone oxidoreductase subunit F.
    
 0.876
SEU01155.1
Rhodanese-related sulfurtransferase.
   
 0.869
Your Current Organism:
Clostridium lavalense
NCBI taxonomy Id: 460384
Other names: CCUG 54291, Clostridium lavalense Domingo et al. 2009, JCM 14986, NML 03-A-015, [. lavalense, [Clostridium] lavalense, strain CCRI-9842
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