Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SET35058.1 | SET35524.1 | SAMN05216313_10515 | SAMN05216313_10539 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.771 |
SET35058.1 | SET35579.1 | SAMN05216313_10515 | SAMN05216313_10542 | Type IV secretion system protein VirD4. | Protein of unknown function. | 0.765 |
SET35058.1 | SET35613.1 | SAMN05216313_10515 | SAMN05216313_10544 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.776 |
SET35058.1 | SET35636.1 | SAMN05216313_10515 | SAMN05216313_10545 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.778 |
SET35058.1 | SET35693.1 | SAMN05216313_10515 | SAMN05216313_10548 | Type IV secretion system protein VirD4. | Pilus assembly protein CpaB. | 0.781 |
SET35058.1 | SET35744.1 | SAMN05216313_10515 | SAMN05216313_10551 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.774 |
SET35058.1 | SET35764.1 | SAMN05216313_10515 | SAMN05216313_10552 | Type IV secretion system protein VirD4. | YodL-like. | 0.788 |
SET35058.1 | SET35811.1 | SAMN05216313_10515 | SAMN05216313_10554 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.763 |
SET35058.1 | SET35895.1 | SAMN05216313_10515 | SAMN05216313_10558 | Type IV secretion system protein VirD4. | DNA adenine methylase. | 0.775 |
SET35058.1 | SET35953.1 | SAMN05216313_10515 | SAMN05216313_10561 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.758 |
SET35524.1 | SET35058.1 | SAMN05216313_10539 | SAMN05216313_10515 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.771 |
SET35524.1 | SET35579.1 | SAMN05216313_10539 | SAMN05216313_10542 | Hypothetical protein. | Protein of unknown function. | 0.887 |
SET35524.1 | SET35613.1 | SAMN05216313_10539 | SAMN05216313_10544 | Hypothetical protein. | Hypothetical protein. | 0.881 |
SET35524.1 | SET35636.1 | SAMN05216313_10539 | SAMN05216313_10545 | Hypothetical protein. | Hypothetical protein. | 0.871 |
SET35524.1 | SET35693.1 | SAMN05216313_10539 | SAMN05216313_10548 | Hypothetical protein. | Pilus assembly protein CpaB. | 0.871 |
SET35524.1 | SET35744.1 | SAMN05216313_10539 | SAMN05216313_10551 | Hypothetical protein. | Hypothetical protein. | 0.796 |
SET35524.1 | SET35764.1 | SAMN05216313_10539 | SAMN05216313_10552 | Hypothetical protein. | YodL-like. | 0.787 |
SET35524.1 | SET35811.1 | SAMN05216313_10539 | SAMN05216313_10554 | Hypothetical protein. | Hypothetical protein. | 0.780 |
SET35524.1 | SET35895.1 | SAMN05216313_10539 | SAMN05216313_10558 | Hypothetical protein. | DNA adenine methylase. | 0.765 |
SET35524.1 | SET35953.1 | SAMN05216313_10539 | SAMN05216313_10561 | Hypothetical protein. | Hypothetical protein. | 0.764 |
page 1 of 6