STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET43698.1Sulfonate transport system permease protein. (256 aa)    
Predicted Functional Partners:
SET43712.1
Sulfonate transport system ATP-binding protein.
 
 
 0.991
SET43733.1
Sulfonate transport system substrate-binding protein.
 
 
 0.983
SES96140.1
Sulfonate transport system ATP-binding protein.
 
 
 0.967
SET44677.1
Sulfonate transport system ATP-binding protein.
 
 
 0.966
SET08308.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.952
SES96078.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 
 0.951
SET97440.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.949
SET44597.1
NMT1/THI5 like.
 
 
 0.937
SET44692.1
Sulfonate transport system ATP-binding protein.
 
 
 0.928
SET08335.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 
 0.900
Your Current Organism:
Clostridium lavalense
NCBI taxonomy Id: 460384
Other names: CCUG 54291, Clostridium lavalense Domingo et al. 2009, JCM 14986, NML 03-A-015, [. lavalense, [Clostridium] lavalense, strain CCRI-9842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.