STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET83302.1Imidazolonepropionase. (414 aa)    
Predicted Functional Partners:
SET83262.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
       0.757
SET83281.1
Protein FrlC.
       0.757
SES92631.1
Hypothetical protein.
  
 
 0.755
SET83323.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.631
SET83343.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.631
SET39098.1
Hypothetical protein.
  
     0.541
SET83363.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
       0.520
SEU12352.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
      0.492
SET84241.1
Hypothetical protein.
  
     0.490
SET59458.1
CubicO group peptidase, beta-lactamase class C family.
  
    0.480
Your Current Organism:
Clostridium lavalense
NCBI taxonomy Id: 460384
Other names: CCUG 54291, Clostridium lavalense Domingo et al. 2009, JCM 14986, NML 03-A-015, [. lavalense, [Clostridium] lavalense, strain CCRI-9842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.